Webphenix.refine is a program within the PHENIX package that supports crystallographic structure refinement against experimental data with a wide range of upper resolution limits using a large repertoire of model parameterizations. It has several automation features and is also highly flexible. WebPhenix Energy Group is an organization dedicated to creating and developing large and complex projects that have both a technological and humanitarian purpose behind them. …
Real-space refinement in PHENIX for cryo-EM and crystallography
WebJan 1, 2005 · Structure refinement was performed with the Refmac5 program supplied in the CCP4 program package or Phenix.refine program supplied in the PHENIX program package [30] [31] [32]. Randomly selected 5 ... Webphenix.refine is a program within the PHENIX package that supports crystallographic structure refinement against experimental data with a wide range of upper resolution … 5xsq社区永久播放地址
Frequently asked questions for phenix.refine
WebThis article describes the implementation of real-space refinement in the phenix.real_space_refine program from the PHENIX suite. The use of a simplified refinement target function enables very fast calculation, which in turn makes it possible to identify optimal data-restraint weights as part of routine refinements with little runtime cost. WebAug 1, 2024 · Here, we report on the incorporation of the OPLS3e force field with the VSGB2.1 solvation model in the structure determination package Phenix. In this work, our results show significantly improved structure quality and reduced ligand strain at lower resolution for X-ray refinement. WebJun 1, 2024 · This article describes the implementation of real-space refinement in the phenix.real_space_refine program from the PHENIX suite. The use of a simplified refinement target function enables very fast calculation, which in turn makes it possible to identify optimal data-restraint weights as part of routine refinements with little runtime cost. 5w理論